HHsearch alignment for GI: 254780270 and conserved domain: PRK10865

Probab=99.88  E-value=9.9e-19  Score=160.65  Aligned_cols=259  Identities=23%  Similarity=0.348  Sum_probs=201.1

Q ss_pred             HHHHHHHHCCCCCCCCCCCCH-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-CCCCCCC--EEEEECCCCCCHHHHHH
Q ss_conf             999876540415876632210-6889987766520116899999999999984-2444673--59986056565027999
Q gi|254780270|r  309 RNYLDWLLGVPWDKKSKTKKN-LDFAIRILDQDHFGLEKVKERIIEYLAVQMR-VIKNKGL--ILCFVGPPGVGKTSLAQ  384 (820)
Q Consensus       309 r~Yld~~~~lPW~~~t~~~~d-l~~a~~iLd~~hyGl~~vK~rile~lav~~~-~~~~~g~--il~l~gppgvGKts~~~  384 (820)
T Consensus       537 a~vvs~~TgIPv~~l~~~e~~~L~~le~~L~~rViGQd~AI~~v~~aI~~sraGL~dp~rPiGsFLFlGPTGVGKTElAK  616 (857)
T PRK10865        537 AEVLARWTGIPVSRMLESEREKLLRMEQELHHRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCK  616 (857)
T ss_pred             HHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHH
T ss_conf             99999996898302131058999999999987852809999999999999863899999973899986898788899999


Q ss_pred             HHHHHH---CCCEEEEECCCCCC---HHHHCCCCCCCCCCCC-HHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHH
Q ss_conf             999770---88249986188888---8883563200145671-2899999832788739999331554231177115566
Q gi|254780270|r  385 SIAKAT---GRQYVRMSLGGVYD---EADIRGHRRTYIGSMP-GRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAAL  457 (820)
Q Consensus       385 sia~al---~r~f~~islgg~~d---~~~i~gh~~ty~ga~p-g~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~al  457 (820)
T Consensus       617 ~LA~~LF~~e~~liriDMSEy~E~hsVSrLiGaPPGYVGy~eGG~LTeaVRr~--PySVvLfDEIEKA----HpdV~nil  690 (857)
T PRK10865        617 ALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRR--PYSVILLDEVEKA----HPDVFNIL  690 (857)
T ss_pred             HHHHHHHCCHHHEEEECCHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHC--CCEEEEEHHHHHH----CHHHHHHH
T ss_conf             99999838933425625332113012767558998766757788110999819--8778863257663----85899999


Q ss_pred             HHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC-------------------------C-CCHHHCCCE-EEEEECCC
Q ss_conf             55406001681332010352364427999934865-------------------------5-441311724-79982587
Q gi|254780270|r  458 LEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTL-------------------------N-IPLPLMDRM-EIIRIAGY  510 (820)
Q Consensus       458 levldp~qn~~f~d~y~~~~~dls~v~fi~tan~~-------------------------~-i~~~l~drm-e~i~~~~y  510 (820)
T Consensus       691 LQvlD---~G~LtD~~-Gr~vdF~NtIIImTSN~Gs~~i~~~~~~~~~~~~~~~~~~~l~~~F~PEFlnRiD~iv~F~pL  766 (857)
T PRK10865        691 LQVLD---DGRLTDGQ-GRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPL  766 (857)
T ss_pred             HHHHC---CCEEECCC-CCEEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCC
T ss_conf             98703---68320799-988851334899646233699986506556688999999999864798888237848982789


Q ss_pred             CHHHHHHHHHHHHH--HHHHHHHCCCCCCCCCCHHHHHHHH-HCCCCCCHHHHHHHHHHHH-HHHHHHHHHCCC
Q ss_conf             86899989998608--9899862578131322899999997-3177410234788879999-898765421178
Q gi|254780270|r  511 TEEEKLQIAKNHLV--KKVLTEHALKQEECCISDGVLLDII-RLFTHEAGVRSFERALMKI-ARKAVTKIVKNS  580 (820)
Q Consensus       511 ~~~ek~~i~~~~l~--p~~~~~~~~~~~~~~~~~~~i~~ii-~~Yt~EaGvR~l~r~i~~i-~r~~~~~~~~~~  580 (820)
T Consensus       767 ~~~~l~~Iv~~~l~~l~~rL~~~~i---~l~~~~~a~~~l~~~gyd~~~GARpl~r~I~~~i~~~ls~~il~g~  837 (857)
T PRK10865        767 GEQHIASIAQIQLQRLYKRLEERGY---EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE  837 (857)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCC---EEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999999999999997798---4998889999999848897747137899999998899999997288