HHsearch alignment for GI: 254780270 and conserved domain: PRK11331

>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.
Probab=98.91  E-value=5.6e-08  Score=79.21  Aligned_cols=137  Identities=26%  Similarity=0.321  Sum_probs=92.1

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCC--CEEEEECCCC----CCHHHHCCCCCCCCCCC--CHHHHHHHHHCCC---
Q ss_conf             46735998605656502799999977088--2499861888----88888356320014567--1289999983278---
Q gi|254780270|r  364 NKGLILCFVGPPGVGKTSLAQSIAKATGR--QYVRMSLGGV----YDEADIRGHRRTYIGSM--PGRIIQSLKRAKR---  432 (820)
Q Consensus       364 ~~g~il~l~gppgvGKts~~~sia~al~r--~f~~islgg~----~d~~~i~gh~~ty~ga~--pg~ii~~l~~~~~---  432 (820)
T Consensus       193 tKknv-IL~G~pGtGKT~lAk~lA~~l~g~~~~~rv~~VqfhpsysYEDfi~Gyrp~~~gf~~~~G~f~~~~~~A~~~p~  271 (459)
T PRK11331        193 IKKNI-ILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPE  271 (459)
T ss_pred             CCCCE-EEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHCCC
T ss_conf             58827-96589998878999999999707887784689983588661787646056888613268369999999984989


Q ss_pred             CCEEEEEECHHHHHHHCCCCHHHH---HHHHCCCCC-C--CCEE-------EEECCCCCCCCCEEEEEECCCCC-----C
Q ss_conf             873999933155423117711556---655406001-6--8133-------20103523644279999348655-----4
Q gi|254780270|r  433 SNPLLLLDEIDKMGSDLRGDPSAA---LLEVLDPAQ-N--SSFV-------DHYLEVEYDLSDVMFIMTANTLN-----I  494 (820)
Q Consensus       433 ~npv~~ldeidk~~~~~~gdp~~a---llevldp~q-n--~~f~-------d~y~~~~~dls~v~fi~tan~~~-----i  494 (820)
T Consensus       272 ~~y~~iidein------r~~~~~~fgel~~liE~dkR~~~~~~~l~ys~~~~~~f~vP---~Nl~iigtmNtadrs~~~~  342 (459)
T PRK11331        272 KKYVFIIDEIN------RANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVP---ENVYIIGLMNTADRSLAVV  342 (459)
T ss_pred             CCEEEEEEHHH------CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCC---CCEEEEEECCCCCHHHHHH
T ss_conf             87699984320------33889999999999641256765225630036888533468---8659998503341068878


Q ss_pred             CHHHCCCEEEEEECCC
Q ss_conf             4131172479982587
Q gi|254780270|r  495 PLPLMDRMEIIRIAGY  510 (820)
Q Consensus       495 ~~~l~drme~i~~~~y  510 (820)
T Consensus       343 d~alrRrf~f~~~~pd  358 (459)
T PRK11331        343 DYALRRRFSFIDIEPG  358 (459)
T ss_pred             HHHHHHHHCCEECCCC
T ss_conf             9999865021215898