HHsearch alignment for GI: 254780270 and conserved domain: PRK12377

Probab=97.35  E-value=0.00067  Score=48.36  Aligned_cols=86  Identities=27%  Similarity=0.436  Sum_probs=49.0

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHH---CCCEEEEECCCCCCHHHHCCCCCCCCCC-CCHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             7359986056565027999999770---8824998618888888835632001456-71289999983278873999933
Q gi|254780270|r  366 GLILCFVGPPGVGKTSLAQSIAKAT---GRQYVRMSLGGVYDEADIRGHRRTYIGS-MPGRIIQSLKRAKRSNPLLLLDE  441 (820)
Q Consensus       366 g~il~l~gppgvGKts~~~sia~al---~r~f~~islgg~~d~~~i~gh~~ty~ga-~pg~ii~~l~~~~~~npv~~lde  441 (820)
T Consensus       101 ~~NlIf~G~pGtGKTHLA~AIg~~a~~~G~sVlF~t~~dL--v~~L~~---a~~~g~~~~k~l~~l~~----~dLLIIDE  171 (248)
T PRK12377        101 CTNFVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTVPDV--MSRLHE---SYDNGQSGEKFLQELCK----VDLLVLDE  171 (248)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHH--HHHHHH---HHHCCCCHHHHHHHHHC----CCEEEEHH
T ss_conf             8608998999987889999999999987996999889999--999999---99848509999999733----89898600


Q ss_pred             HHHHHHHCCCCHHHHHHHHCC
Q ss_conf             155423117711556655406
Q gi|254780270|r  442 IDKMGSDLRGDPSAALLEVLD  462 (820)
Q Consensus       442 idk~~~~~~gdp~~allevld  462 (820)
T Consensus       172 lG~~~~s--~~~~~llfqlI~  190 (248)
T PRK12377        172 IGIQRET--KNEQVVLNQIID  190 (248)
T ss_pred             CCCCCCC--HHHHHHHHHHHH
T ss_conf             0578898--679999999999