HHsearch alignment for GI: 254780270 and conserved domain: PRK13948
>PRK13948 shikimate kinase; Provisional.
Probab=97.52 E-value=9.6e-05 Score=54.76 Aligned_cols=34 Identities=18% Similarity=0.374 Sum_probs=30.4
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEE
Q ss_conf 4673599860565650279999997708824998
Q gi|254780270|r 364 NKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRM 397 (820)
Q Consensus 364 ~~g~il~l~gppgvGKts~~~sia~al~r~f~~i 397 (820)
T Consensus 8 ~~~~~IvLIG~mGsGKStiGk~LA~~l~~~fiD~ 41 (182)
T PRK13948 8 RPATFVALAGFMGTGKSRIGWELSRALALHFVDT 41 (182)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEC
T ss_conf 9998189889999988999999999969598888