HHsearch alignment for GI: 254780270 and conserved domain: PTZ00111
>PTZ00111 DNA replication licensing factor MCM4; Provisional.
Probab=98.43 E-value=1.5e-06 Score=68.38 Aligned_cols=164 Identities=21% Similarity=0.288 Sum_probs=98.8
Q ss_pred HHHHHHCHHHHHHHHHHHHH--HHHH---CC---------CCCCCE-EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 76652011689999999999--9984---24---------446735-998605656502799999977088249986188
Q gi|254780270|r 337 LDQDHFGLEKVKERIIEYLA--VQMR---VI---------KNKGLI-LCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGG 401 (820)
Q Consensus 337 Ld~~hyGl~~vK~rile~la--v~~~---~~---------~~~g~i-l~l~gppgvGKts~~~sia~al~r~f~~islgg 401 (820)
T Consensus 449 iAPSI~~~~dvKkgillqLFGg~~k~~~~~~~~~~~~~~~~~RgdIniLl~GDPgtaKSQlL~yv~~iaPRgvyt-sGkg 527 (916)
T PTZ00111 449 FAPSIKARNNVKIGLLCQLFSCNANSSDNNKSPDACYKVDNFRGIINVLLCGDPGTAKSQLLHYTHLLSPRSIYT-SGKS 527 (916)
T ss_pred HCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEE-CCCC
T ss_conf 086211522699999999848875456778776544444443454059995799601899999999728742674-5986
Q ss_pred CCCH---HHH--C--CCCCCC--CCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEE
Q ss_conf 8888---883--5--632001--456712899999832788739999331554231177115566554060016813320
Q gi|254780270|r 402 VYDE---ADI--R--GHRRTY--IGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDH 472 (820)
Q Consensus 402 ~~d~---~~i--~--gh~~ty--~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~ 472 (820)
T Consensus 528 sSavGLTA~v~~~d~~tg~~~LEaGAL----------VLaD~GvccIDEFDKM~~~~r----s~lhEaMEQ--Q------ 585 (916)
T PTZ00111 528 SSSVGLTASIKFNESDNGRAMIQPGAV----------VLANGGVCCIDELDKCHNESR----LSLYEVMEQ--Q------ 585 (916)
T ss_pred CCCCCCEEEEEECCCCCCCEEEECCCE----------EECCCCEEEEEHHHCCCHHHH----HHHHHHHHH--H------
T ss_conf 542264689983268878689854808----------972798799622203685678----899998866--3------
Q ss_pred ECCCCCCCCCEEEEEECC------------------------CCCCCHHHCCCEEEEEECCCCHHHH------HHHHHHH
Q ss_conf 103523644279999348------------------------6554413117247998258786899------9899986
Q gi|254780270|r 473 YLEVEYDLSDVMFIMTAN------------------------TLNIPLPLMDRMEIIRIAGYTEEEK------LQIAKNH 522 (820)
Q Consensus 473 y~~~~~dls~v~fi~tan------------------------~~~i~~~l~drme~i~~~~y~~~ek------~~i~~~~ 522 (820)
T Consensus 586 ----tvSIAKAGI~~tLnARtSvLAaANP~~gry~~~~~v~enI~lpp~LLSRFDLIfl~lD~~de~~Dr~IA~hIa~~~ 661 (916)
T PTZ00111 586 ----TVTIAKAGIVATLKAETAILASCNPINSRYNKNKAVIENINISPSLFTRFDLIYLVLDHIDQDTDQLISLSIAKDF 661 (916)
T ss_pred ----HHHHHHCCEEEEECHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf ----1235323504541203456553286556578786767645799403312204677505786566689999998766
Q ss_pred HHHHH
Q ss_conf 08989
Q gi|254780270|r 523 LVKKV 527 (820)
Q Consensus 523 l~p~~ 527 (820)
T Consensus 662 L~~hl 666 (916)
T PTZ00111 662 LLPHM 666 (916)
T ss_pred HHHHC
T ss_conf 54310