HHsearch alignment for GI: 254780270 and conserved domain: cd00009

>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=99.43  E-value=1.2e-12  Score=114.72  Aligned_cols=132  Identities=25%  Similarity=0.335  Sum_probs=90.6

Q ss_pred             HHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH---CCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             984244467359986056565027999999770---88249986188888888356320014567128999998327887
Q gi|254780270|r  358 QMRVIKNKGLILCFVGPPGVGKTSLAQSIAKAT---GRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSN  434 (820)
Q Consensus       358 ~~~~~~~~g~il~l~gppgvGKts~~~sia~al---~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~n  434 (820)
T Consensus        11 ~~~~~~~~~~~ill~GppGtGKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   85 (151)
T cd00009          11 REALELPPPKNLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNASDLLEGLVVAELFGHF-----LVRLLFELAEKAKP   85 (151)
T ss_pred             HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHH-----HHHHHHHHHHHCCC
T ss_conf             9998187998089989999886599999999712137982785477704677775760577-----88989999997699


Q ss_pred             EEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC---CCCHHHCCCEE-EEEE
Q ss_conf             3999933155423117711556655406001681332010352364427999934865---54413117247-9982
Q gi|254780270|r  435 PLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTL---NIPLPLMDRME-IIRI  507 (820)
Q Consensus       435 pv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~---~i~~~l~drme-~i~~  507 (820)
T Consensus        86 ~vl~iDEi~~l~~~~~----~~~~~~l~~~~~~---------~~~~~~~~vI~~tn~~~~~~~~~~~~~R~~~~i~~  149 (151)
T cd00009          86 GVLFIDEIDSLSRGAQ----NALLRVLETLNDL---------RIDRENVRVIGATNRPLLGDLDRALYDRLDIRIVI  149 (151)
T ss_pred             CEEEEECHHHCCHHHH----HHHHHHHHHHCCC---------CCCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEC
T ss_conf             8698201665599999----9999999871575---------40678889999528998868377642559869863