HHsearch alignment for GI: 254780270 and conserved domain: cd01394

>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.

Probab=95.67  E-value=0.027  Score=36.24  Aligned_cols=28  Identities=39%  Similarity=0.675  Sum_probs=24.0

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             4467359986056565027999999770
Q gi|254780270|r  363 KNKGLILCFVGPPGVGKTSLAQSIAKAT  390 (820)
Q Consensus       363 ~~~g~il~l~gppgvGKts~~~sia~al  390 (820)
T Consensus        16 i~~G~it~i~G~pG~GKStl~lq~a~~~   43 (218)
T cd01394          16 VERGTVTQVYGPPGTGKTNIAIQLAVET   43 (218)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             8788799998999984999999999998