HHsearch alignment for GI: 254780270 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=95.49 E-value=0.016 Score=37.94 Aligned_cols=27 Identities=37% Similarity=0.523 Sum_probs=23.2
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 467359986056565027999999770
Q gi|254780270|r 364 NKGLILCFVGPPGVGKTSLAQSIAKAT 390 (820)
Q Consensus 364 ~~g~il~l~gppgvGKts~~~sia~al 390 (820)
T Consensus 25 ~~Ge~v~i~G~sGsGKSTLl~~l~Gl~ 51 (166)
T cd03223 25 KPGDRLLITGPSGTGKSSLFRALAGLW 51 (166)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHCCCC
T ss_conf 899999999589998899999986987