HHsearch alignment for GI: 254780270 and conserved domain: cd03227
>cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport. These families are characterised by the fact that the ABC subunit is made up of duplicated, fused ABC modules (ABC2). No known transmembrane proteins or domains are associated with these proteins.
Probab=96.12 E-value=0.013 Score=38.64 Aligned_cols=91 Identities=29% Similarity=0.349 Sum_probs=48.4
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCC-----------------CEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 6735998605656502799999977088-----------------24998618888888835632001456712899999
Q gi|254780270|r 365 KGLILCFVGPPGVGKTSLAQSIAKATGR-----------------QYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSL 427 (820)
Q Consensus 365 ~g~il~l~gppgvGKts~~~sia~al~r-----------------~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l 427 (820)
T Consensus 20 ~g~~~iItGpN~sGKSt~Lr~i~l~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~lSgg~~~-----~~~l~~~l 92 (162)
T cd03227 20 EGSLTIITGPNGSGKSTILDAIGLALGGAQSATRRRSGVKAGCIVAAVSAELIFTRL--QLSGGEKE-----LSALALIL 92 (162)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHEEEEEECCC--CCCCCHHH-----HHHHHHHH
T ss_conf 986899989987757999999999999863267752555427764023057664120--00542999-----99999999
Q ss_pred HHCCC-CCEEEEEECHHHHHHHCCC-CHHHHHHHHCC
Q ss_conf 83278-8739999331554231177-11556655406
Q gi|254780270|r 428 KRAKR-SNPLLLLDEIDKMGSDLRG-DPSAALLEVLD 462 (820)
Q Consensus 428 ~~~~~-~npv~~ldeidk~~~~~~g-dp~~allevld 462 (820)
T Consensus 93 ~~~~~~~~~lillDE~~~Gtd~~~~~~l~~~i~~~~~ 129 (162)
T cd03227 93 ALASLKPRPLYILDEIDRGLDPRDGQALAEAILEHLV 129 (162)
T ss_pred HHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8542489848996365579998899999999999997