HHsearch alignment for GI: 254780270 and conserved domain: cd03259
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.13 E-value=0.067 Score=33.19 Aligned_cols=38 Identities=32% Similarity=0.516 Sum_probs=28.1
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 46735998605656502799999977088249986188
Q gi|254780270|r 364 NKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGG 401 (820)
Q Consensus 364 ~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg 401 (820)
T Consensus 24 ~~Gei~~iiGpnGaGKSTl~~~i~Gl~~p~~G~I~~~g 61 (213)
T cd03259 24 EPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDG 61 (213)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf 89989999999997399999999759998970899999