HHsearch alignment for GI: 254780270 and conserved domain: cd03296
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.40 E-value=0.054 Score=33.94 Aligned_cols=38 Identities=32% Similarity=0.538 Sum_probs=29.6
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 46735998605656502799999977088249986188
Q gi|254780270|r 364 NKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGG 401 (820)
Q Consensus 364 ~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg 401 (820)
T Consensus 26 ~~Ge~~~iiGpSGsGKSTll~~i~Gl~~p~~G~I~~~g 63 (239)
T cd03296 26 PSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGG 63 (239)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf 89989999999997799999999769999863999999