HHsearch alignment for GI: 254780270 and conserved domain: pfam00004
>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Probab=99.67 E-value=2.8e-16 Score=142.05 Aligned_cols=119 Identities=31% Similarity=0.550 Sum_probs=94.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCE-EEEEECHHHHHH
Q ss_conf 9986056565027999999770882499861888888883563200145671289999983278873-999933155423
Q gi|254780270|r 369 LCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNP-LLLLDEIDKMGS 447 (820)
Q Consensus 369 l~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~np-v~~ldeidk~~~ 447 (820)
T Consensus 1 iLl~GppGtGKT~~a~~la~~~~~~~~~v~~~~~~~---------~~~g~~~~~i~~~f~~a~~~~p~Il~iDe~d~l~~ 71 (131)
T pfam00004 1 LLLYGPPGTGKTTLAKAVAKELGAPFIEISGSELVS---------KYVGESEKRLRELFEAAKKLAPCVIFIDEIDALAG 71 (131)
T ss_pred CEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCC---------CCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHC
T ss_conf 987899999999999999999789853324201222---------33450688899999999974991898311677751
Q ss_pred HC-CC------CHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC-CCHHHC-CCEEE-EEEC
Q ss_conf 11-77------115566554060016813320103523644279999348655-441311-72479-9825
Q gi|254780270|r 448 DL-RG------DPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLN-IPLPLM-DRMEI-IRIA 508 (820)
Q Consensus 448 ~~-~g------dp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~-i~~~l~-drme~-i~~~ 508 (820)
T Consensus 72 ~~~~~~~~~~~~~~~~ll~~ld~~~~------------~~~~v~~I~tTN~~~~ld~al~r~Rfd~~i~~p 130 (131)
T pfam00004 72 SRGSGGDSESRRVVNQLLTELDGFTS------------SLSKVIVIAATNRPDKLDPALLRGRFDRIIEFP 130 (131)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCC------------CCCCEEEEEECCCHHHCCHHHHCCCCEEEEEEC
T ss_conf 67888887513268789999850224------------688769999759904499779628332899806