HHsearch alignment for GI: 254780270 and conserved domain: pfam00910

>pfam00910 RNA_helicase RNA helicase. This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Probab=97.22  E-value=0.00033  Score=50.68  Aligned_cols=98  Identities=21%  Similarity=0.417  Sum_probs=50.7

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHH
Q ss_conf             99860565650279999997708824998618888888835632001456712899999832788739999331554231
Q gi|254780270|r  369 LCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSD  448 (820)
Q Consensus       369 l~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~  448 (820)
T Consensus         1 i~l~G~~G~GKS~~a~~la~~~~~~~~~------------~~~~~~Y~~~~~~~~wdgY----~gq~vvi~DD~~~~~~-   63 (105)
T pfam00910         1 IWLYGPPGCGKSTLAKYLARALLDHLGL------------PKKDSVYSRNPDDDFWDGY----TGQPVVIIDDFGQNPD-   63 (105)
T ss_pred             CEEECCCCCCHHHHHHHHHHHHHHHHCC------------CCCCCEEECCCCCCCCCCC----CCCEEEEEECCCCCCC-
T ss_conf             9897999898899999999999998377------------8789779678877656788----9985799965777888-


Q ss_pred             CCCC-HHHHHHHHCCCCCCCCEEEEE--C---CCCCCCCCEEEEEECC
Q ss_conf             1771-155665540600168133201--0---3523644279999348
Q gi|254780270|r  449 LRGD-PSAALLEVLDPAQNSSFVDHY--L---EVEYDLSDVMFIMTAN  490 (820)
Q Consensus       449 ~~gd-p~~allevldp~qn~~f~d~y--~---~~~~dls~v~fi~tan  490 (820)
T Consensus        64 --~~~~~~~~~~lvs---~~p~~~~ma~le~Kg~~f~-s~~-vi~tsN  104 (105)
T pfam00910        64 --GPSDEAELIRLVS---STPYPPPMAALEEKGTPFT-SKF-VIVTSN  104 (105)
T ss_pred             --CCHHHHHHHHHHC---CCCCCCCCCCHHHCCCCCC-CCE-EEEECC
T ss_conf             --6288999998756---9983888667614888446-888-999479