HHsearch alignment for GI: 254780270 and conserved domain: pfam03215

Probab=97.89  E-value=0.00036  Score=50.42  Aligned_cols=112  Identities=26%  Similarity=0.384  Sum_probs=63.0

Q ss_pred             CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEE----ECCCCCCHH---HHCCCCCCCCCCCCHHHHH--------
Q ss_conf             2444673599860565650279999997708824998----618888888---8356320014567128999--------
Q gi|254780270|r  361 VIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRM----SLGGVYDEA---DIRGHRRTYIGSMPGRIIQ--------  425 (820)
Q Consensus       361 ~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~i----slgg~~d~~---~i~gh~~ty~ga~pg~ii~--------  425 (820)
T Consensus        40 ~~~~~~~iLlLtGPaG~GKTTTI~lLAkeLG~ei~EW~NP~~~~~~~~~~q~~d~~g~~~~~~~S~~~~F~eFLlr~~ky  119 (490)
T pfam03215        40 LESNKQLILLLTGPSGCGKSTTVKVLSKELGIEIIEWSNPEYLHNPDNECQKPDFRGDCIVNSLSQMEQFREFLLRGARY  119 (490)
T ss_pred             CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf             47777318998798998899999999997596899814865456775022101212345766663777767887622335


Q ss_pred             -HHHHCCCCCEEEEEECHHHHHHHCCCCHH---HHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEC
Q ss_conf             -99832788739999331554231177115---56655406001681332010352364427999934
Q gi|254780270|r  426 -SLKRAKRSNPLLLLDEIDKMGSDLRGDPS---AALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTA  489 (820)
Q Consensus       426 -~l~~~~~~npv~~ldeidk~~~~~~gdp~---~allevldp~qn~~f~d~y~~~~~dls~v~fi~ta  489 (820)
T Consensus       120 ~sL~~~~~~kriILIEE~P---n~~~~d~~~fr~~L~~~L~s~~~--------------~PlV~IiSE  170 (490)
T pfam03215       120 GSLQGGGLKKKLILVEELP---NQFYSDAEKFREVIREVLQSIWH--------------LPLIFCLTE  170 (490)
T ss_pred             CCCCCCCCCCEEEEEECCC---CCCCCCHHHHHHHHHHHHHHCCC--------------CCEEEEEEE
T ss_conf             6544578873599996588---74423669999999999970899--------------987999970