HHsearch alignment for GI: 254780270 and conserved domain: pfam05272

>pfam05272 VirE Virulence-associated protein E. This family contains several bacterial virulence-associated protein E like proteins.
Probab=95.60  E-value=0.21  Score=29.40  Aligned_cols=159  Identities=17%  Similarity=0.262  Sum_probs=82.4

Q ss_pred             HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHH--HHHHHH--H-HH-HHHCCCCC-CCEEEEECCCCCCHHHHHHHH
Q ss_conf             65404158766322106889987766520116899--999999--9-99-98424446-735998605656502799999
Q gi|254780270|r  314 WLLGVPWDKKSKTKKNLDFAIRILDQDHFGLEKVK--ERIIEY--L-AV-QMRVIKNK-GLILCFVGPPGVGKTSLAQSI  386 (820)
Q Consensus       314 ~~~~lPW~~~t~~~~dl~~a~~iLd~~hyGl~~vK--~rile~--l-av-~~~~~~~~-g~il~l~gppgvGKts~~~si  386 (820)
T Consensus         1 yl~sl~WDG~~-------Ri~~l~-~~~~g~~d~~~~~~~~~~wligaVaR~~~pG~k~d~vlvL~G~QG~gKStf~~~L   72 (198)
T pfam05272         1 YLESLEWDGIP-------RIETLF-IDYLGAEDSLYTREVSKLFLIGAVARVYEPGCKFDHVLILQGAQGSGKSTFLKKL   72 (198)
T ss_pred             CCCCCCCCCCC-------HHHHHH-HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHH
T ss_conf             98568768811-------799999-9962999759999999999999999997789767767899889867899999997


Q ss_pred             HHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCC
Q ss_conf             97708824998618888888835632001456712899999832788739999331554231177115566554060016
Q gi|254780270|r  387 AKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQN  466 (820)
Q Consensus       387 a~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn  466 (820)
T Consensus        73 ~~----~~~~d~~~~~~~-------k---------D~~~~l~~----~wi~el~El~~~~k---~~-~~~-lK~fls~~~  123 (198)
T pfam05272        73 GG----EWFTDSIRSFEG-------K---------DAYEKLQG----VWIVEIAELDGFSK---AE-VEA-IKAFITRTV  123 (198)
T ss_pred             HH----HHCCCCCCCCCC-------C---------HHHHHHHH----HHHHHHHHHHHCCH---HH-HHH-HHHHHCCHH
T ss_conf             37----751565557677-------3---------89999998----78732598751365---32-999-999845413


Q ss_pred             CCEEEEECCCCCC-CCCEEEEEECCCCC-CCHHH-CCCEEEEEECC
Q ss_conf             8133201035236-44279999348655-44131-17247998258
Q gi|254780270|r  467 SSFVDHYLEVEYD-LSDVMFIMTANTLN-IPLPL-MDRMEIIRIAG  509 (820)
Q Consensus       467 ~~f~d~y~~~~~d-ls~v~fi~tan~~~-i~~~l-~drme~i~~~~  509 (820)
T Consensus       124 d~~R~pY~~~~~~~pR~~vfigTtN~~~~L~D~TGnRRF~pi~v~~  169 (198)
T pfam05272       124 DSFRAPYGRRAESFPRQCVFVGTTNRDEFLKDPTGNRRFWPVKVGK  169 (198)
T ss_pred             HCCHHCCCCCCEECCEEEEEEEECCCCCCCCCCCCCEEEEEEEECC
T ss_conf             1231022356400654799999638876557999981689999688