HHsearch alignment for GI: 254780271 and conserved domain: CHL00095

>CHL00095 clpC Clp protease ATP binding subunit.
Probab=98.60  E-value=7.4e-07  Score=68.57  Aligned_cols=98  Identities=30%  Similarity=0.425  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHH---CCC-------EEEHHHHHH-HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             56835884073321769999999871---853-------131012211-1111035563303577887654227765422
Q gi|254780271|r  112 AKSNILLVGPTGCGKTYLAQTLARII---DVP-------FTMADATTL-TEAGYVGEDVENIILKLLQAADYNVERAQRG  180 (424)
Q Consensus       112 ~~~NILliGPTGvGKTelAr~LAk~l---~~P-------F~~vdaT~~-TE~GYvG~Dvesii~~L~~~a~~~v~~a~~~  180 (424)
T Consensus       199 ~KNNpiLvGepGVGKTAIvEGLA~rI~~g~VP~~L~~~~i~sLDl~~L~AGtkyRGe-FEeRlk~il~e----i~~~~~i  273 (823)
T CHL00095        199 TKNNPILIGEPGVGKTAIAEGLAQRIANRDVPDILEDKLVLTLDIGLLLAGTKYRGE-FEERIKKIMDE----IKKANNI  273 (823)
T ss_pred             CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEHHHHHHCCCCCHH-HHHHHHHHHHH----HHHCCCE
T ss_conf             248850237999879999999999760889986875993688428877533422267-99999999999----9857986


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
Q ss_conf             3332233320023333334432102568988753105870
Q gi|254780271|r  181 IVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTI  220 (424)
Q Consensus       181 iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~  220 (424)
T Consensus       274 ILFIDEiHtlvGaG~~-~-----g~~DaaNlLKPaLarGe  307 (823)
T CHL00095        274 ILVIDEIHTLIGAGAA-E-----GAIDAANILKPALARGK  307 (823)
T ss_pred             EEEECCHHHHCCCCCC-C-----CCHHHHHHHHHHHHCCC
T ss_conf             9997351653288976-6-----64317887657864898