HHsearch alignment for GI: 254780271 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=99.44 E-value=9.5e-12 Score=102.83 Aligned_cols=179 Identities=28% Similarity=0.341 Sum_probs=121.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCC
Q ss_conf 308599999999999865887521210-1355225683588407332176999999987185313101221111110355
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSK-SSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGE 157 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~-~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~ 157 (424)
T Consensus 244 iggl~~~k~~l~e~v~~~~~~~e~~~~~~~~---~~~giLl~GpPGtGKT~lAkava~~~~~~fi~v~~~~l~s-k~vGe 319 (494)
T COG0464 244 IGGLEEAKEELKEAIETPLKRPELFRKLGLR---PPKGVLLYGPPGTGKTLLAKAVALESRSRFISVKGSELLS-KWVGE 319 (494)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHH-HHHHH
T ss_conf 2363779999999999999708876325898---8836999889997589999998754498248843355540-77659
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEE
Q ss_conf 63303577887654227765422333223332002333333443210256898875310587010256556432224302
Q gi|254780271|r 158 DVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFL 237 (424)
Q Consensus 158 Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~grk~~~~~~~ 237 (424)
T Consensus 320 s-ek~ir~~F~~A~----~~~p~iifiDEiDs~~~~r~~~---~~~~~~rv~~~ll~~~d~~e~~-----------~~v~ 380 (494)
T COG0464 320 S-EKNIRELFEKAR----KLAPSIIFIDEIDSLASGRGPS---EDGSGRRVVGQLLTELDGIEKA-----------EGVL 380 (494)
T ss_pred H-HHHHHHHHHHHH----HCCCCEEEHHHHHHHHCCCCCC---CCCHHHHHHHHHHHHHHCCCCC-----------CCEE
T ss_conf 9-999999999999----6699889748866674128998---7637999999999997475443-----------7648
Q ss_pred EEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCC
Q ss_conf 43100012322000467898876412343332111100000001689996410567775220689872078426721110
Q gi|254780271|r 238 QVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGRLPVLATLEDLD 317 (424)
Q Consensus 238 ~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GRlPiiV~L~~Lt 317 (424)
T Consensus 381 vi~aTN~p~~l----------------------------------d~a------------~lR~---gRfd~~i~v~~pd 411 (494)
T COG0464 381 VIAATNRPDDL----------------------------------DPA------------LLRP---GRFDRLIYVPLPD 411 (494)
T ss_pred EEECCCCCCCC----------------------------------CHH------------HHCC---CCCEEEEEECCCC
T ss_conf 99647983326----------------------------------875------------6243---6630378717989
Q ss_pred HHHHHHHHHHHH
Q ss_conf 578999987426
Q gi|254780271|r 318 ENSLIRILSEPK 329 (424)
Q Consensus 318 ~edl~rILtepk 329 (424)
T Consensus 412 ~~~r~~i~~~~~ 423 (494)
T COG0464 412 LEERLEIFKIHL 423 (494)
T ss_pred HHHHHHHHHHHH
T ss_conf 899999999985