HHsearch alignment for GI: 254780271 and conserved domain: COG0465
>COG0465 HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones].
Probab=99.04 E-value=1e-09 Score=88.54 Aligned_cols=129 Identities=31% Similarity=0.439 Sum_probs=97.7
Q ss_pred HCCCHHHHHHHHHHHH---H--HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHH
Q ss_conf 0308599999999999---8--6588752121013552256835884073321769999999871853131012211111
Q gi|254780271|r 78 YVIGQGQAKKVLAVAV---H--NHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEA 152 (424)
Q Consensus 78 yVIGQ~~AKkavAvAv---~--nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~ 152 (424)
T Consensus 151 DVAG~dEakeel~EiVdfLk~p~ky~~l-------Ga-kiPkGvlLvGpPGTGKTLLAkAvAgEA~VPFf~iSGS~FVem 222 (596)
T COG0465 151 DVAGVDEAKEELSELVDFLKNPKKYQAL-------GA-KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEM 222 (596)
T ss_pred HHCCCHHHHHHHHHHHHHHHCCHHHHHC-------CC-CCCCCEEEECCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHH
T ss_conf 6418679999999999986385566752-------35-345652685599987278999984546898353034446443
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
Q ss_conf 10355633035778876542277654223332233320023333334432102568988753105870
Q gi|254780271|r 153 GYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTI 220 (424)
Q Consensus 153 GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~ 220 (424)
T Consensus 223 -fVGvG-AsRVRdLF~qAkk~----aP~IIFIDEiDAvGr~Rg~g~GggnderEQTLNQlLvEmDGF~ 284 (596)
T COG0465 223 -FVGVG-ASRVRDLFEQAKKN----APCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFG 284 (596)
T ss_pred -HCCCC-CHHHHHHHHHHHCC----CCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf -14788-38889999985515----9966987634331454577889980699999988885201578