HHsearch alignment for GI: 254780271 and conserved domain: COG1493
>COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms].
Probab=93.82 E-value=0.032 Score=36.17 Aligned_cols=105 Identities=23% Similarity=0.388 Sum_probs=60.6
Q ss_pred CCCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 26998789999974203---0859999999999986588752121013---55225683588407332176999999987
Q gi|254780271|r 63 EGIPNPQEILRVLDEYV---IGQGQAKKVLAVAVHNHYKRLAHSSKSS---NVELAKSNILLVGPTGCGKTYLAQTLARI 136 (424)
Q Consensus 63 ~~~~tP~eI~~~Ld~yV---IGQ~~AKkavAvAv~nh~rR~~~~~~~~---~~ei~~~NILliGPTGvGKTelAr~LAk~ 136 (424)
T Consensus 89 k~~~~p~~l~~~a~~~~~pil~s~~~ts~l~~~l~~yL~~~lA~~~~vHGvl~~I~GvGVLItG~SG~GKSElALeLi~r 168 (308)
T COG1493 89 KGLPIPEELLDAAKKYNIPILTSKLSTSELSFTLTNYLSRPLAERVNVHGVLLDIFGVGVLITGPSGAGKSELALELIKR 168 (308)
T ss_pred CCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 89999789999988709966985331899999999986131052025546899994258999878988776899999984
Q ss_pred HCCCEEEHHHHHHHH---HHHCCCCCCCHHHHHHHH
Q ss_conf 185313101221111---110355633035778876
Q gi|254780271|r 137 IDVPFTMADATTLTE---AGYVGEDVENIILKLLQA 169 (424)
Q Consensus 137 l~~PF~~vdaT~~TE---~GYvG~Dvesii~~L~~~ 169 (424)
T Consensus 169 ghr-LVaDD~V~i~~~~~~~L~gr-~pe~l~gllEI 202 (308)
T COG1493 169 GHR-LVADDAVEIFREGGNRLVGR-APELLAGLLEI 202 (308)
T ss_pred CCC-EECCCCEEEEECCCCEEEEC-CHHHHCCCEEE
T ss_conf 550-13256078884369767604-82786483785