HHsearch alignment for GI: 254780271 and conserved domain: COG2812
>COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair].
Probab=98.30 E-value=7.5e-07 Score=68.53 Aligned_cols=115 Identities=29% Similarity=0.460 Sum_probs=79.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC-------CEEEHHHHHHHH
Q ss_conf 3085999999999998658875212101355225683588407332176999999987185-------313101221111
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDV-------PFTMADATTLTE 151 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~-------PF~~vdaT~~TE 151 (424)
T Consensus 18 vvGQe~v~~~L~nal~~~--ri------------~hAYlfsG~RGvGKTt~Ari~AkalNC~~~~~~ePC~~C~~Ck~I~ 83 (515)
T COG2812 18 VVGQEHVVKTLSNALENG--RI------------AHAYLFSGPRGVGKTTIARILAKALNCENGPTAEPCGKCISCKEIN 83 (515)
T ss_pred HCCCHHHHHHHHHHHHHC--CC------------HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 636489999999999808--42------------3336513777767104999999995688987777225316668651
Q ss_pred HH-HCC---------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
Q ss_conf 11-035---------56330357788765422776542233322333200233333344321025689887531058701
Q gi|254780271|r 152 AG-YVG---------EDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIA 221 (424)
Q Consensus 152 ~G-YvG---------~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~ 221 (424)
T Consensus 84 ~g~~~DviEiDaASn~gVd-diR~i~e~v~y~P~~~ryKVyiIDEvHMLS~~--------------afNALLKTLEEPP~ 148 (515)
T COG2812 84 EGSLIDVIEIDAASNTGVD-DIREIIEKVNYAPSEGRYKVYIIDEVHMLSKQ--------------AFNALLKTLEEPPS 148 (515)
T ss_pred CCCCCCCHHHHHHHCCCHH-HHHHHHHHHCCCCCCCCCEEEEEECHHHHHHH--------------HHHHHHCCCCCCCC
T ss_conf 4886410113644454867-99999987246886666418998318764378--------------88887511136866
Q ss_pred E
Q ss_conf 0
Q gi|254780271|r 222 S 222 (424)
Q Consensus 222 ~ 222 (424)
T Consensus 149 h 149 (515)
T COG2812 149 H 149 (515)
T ss_pred C
T ss_conf 7