HHsearch alignment for GI: 254780271 and conserved domain: COG3283
>COG3283 TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism].
Probab=95.97 E-value=0.012 Score=39.15 Aligned_cols=88 Identities=30% Similarity=0.471 Sum_probs=61.3
Q ss_pred EEEEECCCCCHHHHHHHHHHH---HCCCEEEHHHHHHHH----HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 588407332176999999987---185313101221111----1103556330357788765422776542233322333
Q gi|254780271|r 116 ILLVGPTGCGKTYLAQTLARI---IDVPFTMADATTLTE----AGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVD 188 (424)
Q Consensus 116 ILliGPTGvGKTelAr~LAk~---l~~PF~~vdaT~~TE----~GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEid 188 (424)
T Consensus 230 LLI~GeTGTGKdLlAkaCH~~S~R~~~pFlalNCA~lPe~~aEsElFG~apg------~~gk~GffE~AngGTVlLDeIg 303 (511)
T COG3283 230 LLITGETGTGKDLLAKACHLASPRHSKPFLALNCASLPEDAAESELFGHAPG------DEGKKGFFEQANGGTVLLDEIG 303 (511)
T ss_pred EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCC------CCCCCCHHHHCCCCEEEEEHHH
T ss_conf 6874488861889999874438455897367644779666767777356888------7776346340269748850033
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHCC-CCEEEC
Q ss_conf 20023333334432102568988753105-870102
Q gi|254780271|r 189 KISRKSDNPSITRDVSGEGVQQALLKIME-GTIASV 223 (424)
Q Consensus 189 Ki~~~~~~~~~~~dvs~~gvq~~LLkile-g~~~~v 223 (424)
T Consensus 304 EmSp~--------------lQaKLLRFL~DGtFRRV 325 (511)
T COG3283 304 EMSPR--------------LQAKLLRFLNDGTFRRV 325 (511)
T ss_pred HCCHH--------------HHHHHHHHHCCCCCCCC
T ss_conf 24998--------------99999998627760003