HHsearch alignment for GI: 254780271 and conserved domain: COG4988

>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].
Probab=94.34  E-value=0.085  Score=33.17  Aligned_cols=47  Identities=19%  Similarity=0.259  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCC--EEEHH---HHH------HHHHHHCCCCC
Q ss_conf             6835884073321769999999871853--13101---221------11111035563
Q gi|254780271|r  113 KSNILLVGPTGCGKTYLAQTLARIIDVP--FTMAD---ATT------LTEAGYVGEDV  159 (424)
Q Consensus       113 ~~NILliGPTGvGKTelAr~LAk~l~~P--F~~vd---aT~------~TE~GYvG~Dv  159 (424)
T Consensus       347 g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p  404 (559)
T COG4988         347 GQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNP  404 (559)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHEEEECCCC
T ss_conf             9679998899997899999984757777844888993100068778886724627998