HHsearch alignment for GI: 254780271 and conserved domain: COG4988
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].
Probab=94.34 E-value=0.085 Score=33.17 Aligned_cols=47 Identities=19% Similarity=0.259 Sum_probs=31.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCC--EEEHH---HHH------HHHHHHCCCCC
Q ss_conf 6835884073321769999999871853--13101---221------11111035563
Q gi|254780271|r 113 KSNILLVGPTGCGKTYLAQTLARIIDVP--FTMAD---ATT------LTEAGYVGEDV 159 (424)
Q Consensus 113 ~~NILliGPTGvGKTelAr~LAk~l~~P--F~~vd---aT~------~TE~GYvG~Dv 159 (424)
T Consensus 347 g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p 404 (559)
T COG4988 347 GQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNP 404 (559)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHEEEECCCC
T ss_conf 9679998899997899999984757777844888993100068778886724627998