HHsearch alignment for GI: 254780271 and conserved domain: KOG0478

Probab=97.07  E-value=0.00019  Score=51.63  Aligned_cols=92  Identities=35%  Similarity=0.456  Sum_probs=58.4

Q ss_pred             CCEEEEECCCCCHHHHHHHHHHHHCCCE-EE---HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8358840733217699999998718531-31---0122111111035563303577887654227765422333223332
Q gi|254780271|r  114 SNILLVGPTGCGKTYLAQTLARIIDVPF-TM---ADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDK  189 (424)
Q Consensus       114 ~NILliGPTGvGKTelAr~LAk~l~~PF-~~---vdaT~~TE~GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidK  189 (424)
T Consensus       463 INILL~GDPGtsKSqlLqyv~~l~pRg~yTSGkGsSavGLT--ayVtrd~dt--kqlVLesGALV-LSD~GiCCIDEFDK  537 (804)
T KOG0478         463 INILLVGDPGTSKSQLLQYCHRLLPRGVYTSGKGSSAVGLT--AYVTKDPDT--RQLVLESGALV-LSDNGICCIDEFDK  537 (804)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHCCE--EEEEECCCC--CEEEEECCCEE-ECCCCEEECHHHHH
T ss_conf             22899469986789999999974775404058763022003--567765765--54665048489-72896577112333


Q ss_pred             HCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECC
Q ss_conf             00233333344321025689887531058701025
Q gi|254780271|r  190 ISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVP  224 (424)
Q Consensus       190 i~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~  224 (424)
T Consensus       538 M~dS--------------trSvLhEvMEQQTvSIA  558 (804)
T KOG0478         538 MSDS--------------TRSVLHEVMEQQTLSIA  558 (804)
T ss_pred             HHHH--------------HHHHHHHHHHHHHHHHH
T ss_conf             3277--------------88999999987631174