HHsearch alignment for GI: 254780271 and conserved domain: KOG0479

Probab=95.67  E-value=0.016  Score=38.17  Aligned_cols=117  Identities=29%  Similarity=0.393  Sum_probs=74.0

Q ss_pred             CCCCCHHHHHHHH----HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf             2699878999997----420308599999999999865887521210135522568358840733217699999998718
Q gi|254780271|r   63 EGIPNPQEILRVL----DEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIID  138 (424)
Q Consensus        63 ~~~~tP~eI~~~L----d~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~  138 (424)
T Consensus       283 ~klsk~kdiFdlLa~SLAPSI~GH~~vKkAillLLlGGvEk~L~NGshlRGDI---NiLlvGDPSvAKSQLLRyVLnt--  357 (818)
T KOG0479         283 KKLSKKKDIFDLLARSLAPSIYGHDYVKKAILLLLLGGVEKNLENGSHLRGDI---NILLVGDPSVAKSQLLRYVLNT--  357 (818)
T ss_pred             HHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCEECCCE---EEEEECCCHHHHHHHHHHHHHC--
T ss_conf             98773178899986503762035799999999998545012057886222520---3898469527899999999841--


Q ss_pred             CCEEEHHHHHHHHHHH--------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             5313101221111110--------3556330357788765422776542233322333200
Q gi|254780271|r  139 VPFTMADATTLTEAGY--------VGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKIS  191 (424)
Q Consensus       139 ~PF~~vdaT~~TE~GY--------vG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~  191 (424)
T Consensus       358 AplAI~--T--TGRGSSGVGLTAAVTtD~eTGERRLE-A-GAMV-LADRGVVCIDEFDKMs  411 (818)
T KOG0479         358 APLAIA--T--TGRGSSGVGLTAAVTTDQETGERRLE-A-GAMV-LADRGVVCIDEFDKMS  411 (818)
T ss_pred             CCCCCC--C--CCCCCCCCCCEEEEEECCCCCHHHHH-C-CCEE-ECCCCEEEEHHCCCCC
T ss_conf             540010--3--68887775514677415553134342-3-8368-7058558731002224