HHsearch alignment for GI: 254780271 and conserved domain: KOG0742
>KOG0742 consensus.
Probab=97.72 E-value=5.9e-05 Score=55.28 Aligned_cols=208 Identities=20% Similarity=0.270 Sum_probs=101.7
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q ss_conf 835884073321769999999871853131012211111103556330357788765----4227765422333223332
Q gi|254780271|r 114 SNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAA----DYNVERAQRGIVYIDEVDK 189 (424)
Q Consensus 114 ~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~Dvesii~~L~~~a----~~~v~~a~~~iv~iDEidK 189 (424)
T Consensus 385 RNilfyGPPGTGKTm~ArelAr~SGlDYA~----------mTGGDVAPlG~qaVTkiH~lFDWakkS~rGLllFIDEADA 454 (630)
T KOG0742 385 RNILFYGPPGTGKTMFARELARHSGLDYAI----------MTGGDVAPLGAQAVTKIHKLFDWAKKSRRGLLLFIDEADA 454 (630)
T ss_pred HHEEEECCCCCCHHHHHHHHHHHCCCCEEH----------HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH
T ss_conf 400324799986049999998852874100----------1378755521788999999878875156644998611678
Q ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCC
Q ss_conf 00233333344321025689887531058701025655643222430243100012322000467898876412343332
Q gi|254780271|r 190 ISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIG 269 (424)
Q Consensus 190 i~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~ 269 (424)
T Consensus 455 FLceRnktym--SEaqRsaLNAlLfRT-Gd------------qSrdivLvlAtNr------------------------- 494 (630)
T KOG0742 455 FLCERNKTYM--SEAQRSALNALLFRT-GD------------QSRDIVLVLATNR------------------------- 494 (630)
T ss_pred HHHHHCCCCC--CHHHHHHHHHHHHHC-CC------------CCCCEEEEEECCC-------------------------
T ss_conf 9987520102--588999998898762-56------------5542689960588-------------------------
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH---------HHHHHHH
Q ss_conf 1111000000016899964105677752206898720784267211105789999874267799---------9999998
Q gi|254780271|r 270 FSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGRLPVLATLEDLDENSLIRILSEPKNALI---------KQYQCLF 340 (424)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GRlPiiV~L~~Lt~edl~rILtepknsLi---------kQy~~Ll 340 (424)
T Consensus 495 ---------------------pgdlD-----sAV~DRide~veFpLPGeEERfkll~lYlnkyi~~~~~~~~~~~~~~lf 548 (630)
T KOG0742 495 ---------------------PGDLD-----SAVNDRIDEVVEFPLPGEEERFKLLNLYLNKYILKPATSGKPGKWSHLF 548 (630)
T ss_pred ---------------------CCCHH-----HHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf ---------------------32101-----6787655541306899778999999999999814777778972155777
Q ss_pred HHCCCEEEECHHHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCC
Q ss_conf 74498999968999999995510--67874236899999967774027678984199983778558
Q gi|254780271|r 341 DMEDVELVFHEDALREIARCAIA--HKTGARGLRSILEKILLDTMFELPMLKGVSSVIISDDVVKG 404 (424)
Q Consensus 341 ~~egV~L~FtdeAi~~IA~~A~~--~niGAR~LrtIiE~iLedimFe~P~~~~~~~v~Id~~~V~~ 404 (424)
T Consensus 549 kk~sQ~i~l~~~~t~~~~~EaAkkTeGfSGREia----kLva~vQAavYg---sedcvLd~~lf~e 607 (630)
T KOG0742 549 KKESQRIKLAGFDTGRKCSEAAKKTEGFSGREIA----KLVASVQAAVYG---SEDCVLDEALFDE 607 (630)
T ss_pred HHHHHEEEECCCHHHHHHHHHHHHCCCCCHHHHH----HHHHHHHHHHHC---CCCHHHHHHHHHH
T ss_conf 6440155443431888999999860687578999----999998898850---4221126999999