HHsearch alignment for GI: 254780271 and conserved domain: KOG1942

Probab=98.04  E-value=4.7e-05  Score=55.96  Aligned_cols=63  Identities=30%  Similarity=0.496  Sum_probs=45.1

Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH--CCCEEEHHHH
Q ss_conf             742030859999999999986588752121013552256835884073321769999999871--8531310122
Q gi|254780271|r   75 LDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARII--DVPFTMADAT  147 (424)
Q Consensus        75 Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l--~~PF~~vdaT  147 (424)
T Consensus        36 ~~~g~vGQ~~AReAagiivd-lik~----K-----kmaGravLlaGppgtGKTAlAlaisqELG~kvPFcpmvgS  100 (456)
T KOG1942          36 VAAGFVGQENAREAAGIIVD-LIKS----K-----KMAGRAVLLAGPPGTGKTALALAISQELGPKVPFCPMVGS  100 (456)
T ss_pred             CCCCCCCCHHHHHHHHHHHH-HHHH----H-----HCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf             24451152666655108999-9986----6-----3267279973699876568999999974799985666410