HHsearch alignment for GI: 254780271 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=98.91 E-value=7.8e-08 Score=75.42 Aligned_cols=211 Identities=20% Similarity=0.256 Sum_probs=117.3
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH-----CCCEEEHHHHHHHH
Q ss_conf 2030859999999999986588752121013552256835884073321769999999871-----85313101221111
Q gi|254780271|r 77 EYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARII-----DVPFTMADATTLTE 151 (424)
Q Consensus 77 ~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l-----~~PF~~vdaT~~TE 151 (424)
T Consensus 30 ~~l~~Re~Ei~~l~~~l~~~l~g-----------~~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~~~~t 98 (394)
T PRK00411 30 ENLPHREEQIEELAFALRPALRG-----------SRPSNVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQIDRT 98 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCC-----------CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 98988599999999999999759-----------9998479988999989999999999999746896599996966898
Q ss_pred H---------HHCCCCCCCH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 1---------1035563303---5778876542277-6542233322333200233333344321025689887531058
Q gi|254780271|r 152 A---------GYVGEDVENI---ILKLLQAADYNVE-RAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEG 218 (424)
Q Consensus 152 ~---------GYvG~Dvesi---i~~L~~~a~~~v~-~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg 218 (424)
T Consensus 99 ~~~i~~~i~~~L~~~~~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~~~~----------~~~vLY~L~r~~~~ 168 (394)
T PRK00411 99 RYAILSEIARSLFGHPPPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLVEKE----------GNDVLYSLLRAHEE 168 (394)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC----------CCHHHHHHHHCCCC
T ss_conf 99999999999569989877878999999999986166975899996554020366----------50899999854022
Q ss_pred CEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 70102565564322243024310001232200046789887641234333211110000000168999641056777522
Q gi|254780271|r 219 TIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFG 298 (424)
Q Consensus 219 ~~~~v~~~~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~g 298 (424)
T Consensus 169 ------------~~~~~~~vI~IsN~~--------------------------------------~~~----------~~ 188 (394)
T PRK00411 169 ------------YPGARIGVIGISSDL--------------------------------------TFL----------YI 188 (394)
T ss_pred ------------CCCCCEEEEEEECCC--------------------------------------CHH----------HH
T ss_conf ------------688738999997687--------------------------------------177----------66
Q ss_pred HHHHHHHCC-CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 068987207-8426721110578999987426779999999987449899996899999999551067874236899999
Q gi|254780271|r 299 LIPEFIGRL-PVLATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARCAIAHKTGARGLRSILEK 377 (424)
Q Consensus 299 liPEl~GRl-PiiV~L~~Lt~edl~rILtepknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~~niGAR~LrtIiE~ 377 (424)
T Consensus 189 Ldprv~S~l~~~~i~F~PY~~~qL~~IL~~R~-------~~af-~~g---v~~~~~i~~~A~~~a~~~GDaR~Aldllr~ 257 (394)
T PRK00411 189 LDPRVKSVFGPEEIVFPPYTADEIFDILKDRV-------EEGF-YPG---VVSDEVLELIADLTGREHGDARVAIDLLRR 257 (394)
T ss_pred HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH-------HHCC-CCC---CCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 40777502786289858999899999999999-------8414-556---789789999999985504758999999999
Q ss_pred HH
Q ss_conf 96
Q gi|254780271|r 378 IL 379 (424)
Q Consensus 378 iL 379 (424)
T Consensus 258 A~ 259 (394)
T PRK00411 258 AG 259 (394)
T ss_pred HH
T ss_conf 99