HHsearch alignment for GI: 254780271 and conserved domain: PRK00411

>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=98.91  E-value=7.8e-08  Score=75.42  Aligned_cols=211  Identities=20%  Similarity=0.256  Sum_probs=117.3

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH-----CCCEEEHHHHHHHH
Q ss_conf             2030859999999999986588752121013552256835884073321769999999871-----85313101221111
Q gi|254780271|r   77 EYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARII-----DVPFTMADATTLTE  151 (424)
Q Consensus        77 ~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l-----~~PF~~vdaT~~TE  151 (424)
T Consensus        30 ~~l~~Re~Ei~~l~~~l~~~l~g-----------~~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~~~~t   98 (394)
T PRK00411         30 ENLPHREEQIEELAFALRPALRG-----------SRPSNVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQIDRT   98 (394)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCC-----------CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             98988599999999999999759-----------9998479988999989999999999999746896599996966898


Q ss_pred             H---------HHCCCCCCCH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             1---------1035563303---5778876542277-6542233322333200233333344321025689887531058
Q gi|254780271|r  152 A---------GYVGEDVENI---ILKLLQAADYNVE-RAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEG  218 (424)
Q Consensus       152 ~---------GYvG~Dvesi---i~~L~~~a~~~v~-~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg  218 (424)
T Consensus        99 ~~~i~~~i~~~L~~~~~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~~~~----------~~~vLY~L~r~~~~  168 (394)
T PRK00411         99 RYAILSEIARSLFGHPPPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLVEKE----------GNDVLYSLLRAHEE  168 (394)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC----------CCHHHHHHHHCCCC
T ss_conf             99999999999569989877878999999999986166975899996554020366----------50899999854022


Q ss_pred             CEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             70102565564322243024310001232200046789887641234333211110000000168999641056777522
Q gi|254780271|r  219 TIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFG  298 (424)
Q Consensus       219 ~~~~v~~~~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~g  298 (424)
T Consensus       169 ------------~~~~~~~vI~IsN~~--------------------------------------~~~----------~~  188 (394)
T PRK00411        169 ------------YPGARIGVIGISSDL--------------------------------------TFL----------YI  188 (394)
T ss_pred             ------------CCCCCEEEEEEECCC--------------------------------------CHH----------HH
T ss_conf             ------------688738999997687--------------------------------------177----------66


Q ss_pred             HHHHHHHCC-CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             068987207-8426721110578999987426779999999987449899996899999999551067874236899999
Q gi|254780271|r  299 LIPEFIGRL-PVLATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARCAIAHKTGARGLRSILEK  377 (424)
Q Consensus       299 liPEl~GRl-PiiV~L~~Lt~edl~rILtepknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~~niGAR~LrtIiE~  377 (424)
T Consensus       189 Ldprv~S~l~~~~i~F~PY~~~qL~~IL~~R~-------~~af-~~g---v~~~~~i~~~A~~~a~~~GDaR~Aldllr~  257 (394)
T PRK00411        189 LDPRVKSVFGPEEIVFPPYTADEIFDILKDRV-------EEGF-YPG---VVSDEVLELIADLTGREHGDARVAIDLLRR  257 (394)
T ss_pred             HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH-------HHCC-CCC---CCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             40777502786289858999899999999999-------8414-556---789789999999985504758999999999


Q ss_pred             HH
Q ss_conf             96
Q gi|254780271|r  378 IL  379 (424)
Q Consensus       378 iL  379 (424)
T Consensus       258 A~  259 (394)
T PRK00411        258 AG  259 (394)
T ss_pred             HH
T ss_conf             99