HHsearch alignment for GI: 254780271 and conserved domain: PRK00771

>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=94.66  E-value=0.12  Score=32.10  Aligned_cols=72  Identities=24%  Similarity=0.320  Sum_probs=46.8

Q ss_pred             CCCCHHHHHHHHHHHCCCHH-----HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             69987899999742030859-----999999999986588752121013552256835884073321769999999871
Q gi|254780271|r   64 GIPNPQEILRVLDEYVIGQG-----QAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARII  137 (424)
Q Consensus        64 ~~~tP~eI~~~Ld~yVIGQ~-----~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l  137 (424)
T Consensus        45 ~~~vvk~f~~~vk~k~~g~~v~~~~~p~q~iikiv~~eL~~llg~--~~~~~~kP~Vim~vGlqGsGKTTT~aKLA~~~  121 (433)
T PRK00771         45 NVKLVMNLSKEIERRALEEEPPKGMSKKEHIIKIVYEELVKLLGE--EAEILLKPQTILLVGLQGSGKTTTAAKLARYF  121 (433)
T ss_pred             CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC--CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             879999999999999714624578998999999999999998496--76566898589997378897899999999999