HHsearch alignment for GI: 254780271 and conserved domain: PRK00771
>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=94.66 E-value=0.12 Score=32.10 Aligned_cols=72 Identities=24% Similarity=0.320 Sum_probs=46.8
Q ss_pred CCCCHHHHHHHHHHHCCCHH-----HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 69987899999742030859-----999999999986588752121013552256835884073321769999999871
Q gi|254780271|r 64 GIPNPQEILRVLDEYVIGQG-----QAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARII 137 (424)
Q Consensus 64 ~~~tP~eI~~~Ld~yVIGQ~-----~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l 137 (424)
T Consensus 45 ~~~vvk~f~~~vk~k~~g~~v~~~~~p~q~iikiv~~eL~~llg~--~~~~~~kP~Vim~vGlqGsGKTTT~aKLA~~~ 121 (433)
T PRK00771 45 NVKLVMNLSKEIERRALEEEPPKGMSKKEHIIKIVYEELVKLLGE--EAEILLKPQTILLVGLQGSGKTTTAAKLARYF 121 (433)
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC--CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 879999999999999714624578998999999999999998496--76566898589997378897899999999999