HHsearch alignment for GI: 254780271 and conserved domain: PRK03992

>PRK03992 proteasome-activating nucleotidase; Provisional.
Probab=99.61  E-value=1.5e-14  Score=122.49  Aligned_cols=226  Identities=24%  Similarity=0.384  Sum_probs=137.4

Q ss_pred             HHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             57422113899134317999999998987421000000269987899999742030859999999999986588752121
Q gi|254780271|r   25 HEVRKLIAGPTVFICDECVELCMDIIREENKSSITKSHEGIPNPQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSS  104 (424)
Q Consensus        25 ~~v~~li~g~~~~iC~~Ci~~~~~i~~~e~~~~~~~~~~~~~tP~eI~~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~  104 (424)
T Consensus        86 ~~~~~l~pg~~V~l~~~~~~i-~~~l~~~~d~~v~-~m~v~e~P~v~~----~dIGGl~~~k~el~E~velPl~~pe-~f  158 (390)
T PRK03992         86 VDRDKLKPGARVALNQQTLAI-VEVLPSEKDPRVR-AMEVIESPDVTY----EDIGGLDEQIREVREAVELPLKNPE-LF  158 (390)
T ss_pred             CCHHHCCCCCEEEECCCCCEE-EEECCCCCCCCCC-CCCCCCCCCCCH----HHHCCHHHHHHHHHHHHHHHHHCHH-HH
T ss_conf             688887999989985353030-5646888786211-042147999984----6614989999999999999865989-99


Q ss_pred             CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             01355225683588407332176999999987185313101221111110355633035778876542277654223332
Q gi|254780271|r  105 KSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYI  184 (424)
Q Consensus       105 ~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~i  184 (424)
T Consensus       159 ~~~Gi~-pPkGvLLyGPPGtGKTllAkAvA~e~~~~fi~v~~s~l~s-k~vGes-ek~vr~lF~~Ar----~~aP~IiFi  231 (390)
T PRK03992        159 EEVGIE-PPKGVLLYGPPGTGKTLLAKAVAHETNATFIRVVGSELVQ-KFIGEG-ARLVRELFELAR----EKAPSIIFI  231 (390)
T ss_pred             HHCCCC-CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHH-CCCCHH-HHHHHHHHHHHH----HHCCCEEEH
T ss_conf             976999-9972786898999789999999987488879966799752-454179-999999999999----709908971


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             23332002333333443210256898875310587010256556432224302431000123220004678988764123
Q gi|254780271|r  185 DEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGE  264 (424)
Q Consensus       185 DEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~  264 (424)
T Consensus       232 DEiDai~~~R~~~~~~g~~ev~r~l~qLL~emDG~~-----------~~~~V~VIaATNrp-------------------  281 (390)
T PRK03992        232 DEIDAIAAKRTDSGTSGDREVQRTLMQLLAEMDGFD-----------PRGNVKIIAATNRP-------------------  281 (390)
T ss_pred             HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-----------CCCCEEEEEECCCC-------------------
T ss_conf             432566335677888620889999999999744877-----------77882799606981-------------------


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHH--HCCCCEEEECCCCHHHHHHHHH
Q ss_conf             4333211110000000168999641056777522068987--2078426721110578999987
Q gi|254780271|r  265 KASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFI--GRLPVLATLEDLDENSLIRILS  326 (424)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~--GRlPiiV~L~~Lt~edl~rILt  326 (424)
T Consensus       282 -------------------d~-------------LDpAllRpGRFDr~I~iplPd~~~R~~Ilk  313 (390)
T PRK03992        282 -------------------DI-------------LDPALLRPGRFDRIIEVPLPDEEGRLEILK  313 (390)
T ss_pred             -------------------HH-------------CCHHHHCCCCCCEEEEECCCCHHHHHHHHH
T ss_conf             -------------------00-------------597775477652388708949999999999