HHsearch alignment for GI: 254780271 and conserved domain: PRK05022
>PRK05022 anaerobic nitric oxide reductase transcription regulator; Provisional.
Probab=99.16 E-value=3.6e-10 Score=91.76 Aligned_cols=219 Identities=20% Similarity=0.314 Sum_probs=137.5
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH---HCCCEEEHHHHHHHHH-
Q ss_conf 203085999999999998658875212101355225683588407332176999999987---1853131012211111-
Q gi|254780271|r 77 EYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARI---IDVPFTMADATTLTEA- 152 (424)
Q Consensus 77 ~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~---l~~PF~~vdaT~~TE~- 152 (424)
T Consensus 186 ~elIG~S~~m~~l----~~~i~~vA---------~sd~pVLI~GEtGTGKelvAr~IH~~S~R~~~Pfv~vNCaalpe~l 252 (510)
T PRK05022 186 GEMIGQSPAMQQL----KKEIEVVA---------ASDLNVLITGETGVGKELVARAIHQASPRAVKPLVYLNCAALPESL 252 (510)
T ss_pred CCEEECCHHHHHH----HHHHHHHH---------CCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH
T ss_conf 9752089999999----99999996---------8999889889898139999999996688789985788899998567
Q ss_pred ------HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCC
Q ss_conf ------10355633035778876542277654223332233320023333334432102568988753105870102565
Q gi|254780271|r 153 ------GYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQ 226 (424)
Q Consensus 153 ------GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~ 226 (424)
T Consensus 253 ~EseLFGh~kGaFtG----A~~~r~G~fe~A~gGTLfLDEI~~Lpl~--------------~Q~KLLrvLq~g~i--qrv 312 (510)
T PRK05022 253 AESELFGHVKGAFTG----AISNRSGKFELADGGTLFLDEIGELPLA--------------LQAKLLRVLQYGEI--QRV 312 (510)
T ss_pred HHHHHCCCCCCCCCC----CCCCCCCCEEECCCCEEEEECHHHCCHH--------------HHHHHHHHHHCCEE--EEC
T ss_conf 899865977788688----6556788101778987987574549999--------------99999999847958--855
Q ss_pred CCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHC
Q ss_conf 56432224302431000123220004678988764123433321111000000016899964105677752206898720
Q gi|254780271|r 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGR 306 (424)
Q Consensus 227 ~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GR 306 (424)
T Consensus 313 G~~~~~~vdvRIIAATnr---------dL~~~---------------------------V~~G--------~FR~DLYyR 348 (510)
T PRK05022 313 GSDRSLRVDVRVIAATNR---------DLREE---------------------------VLAG--------RFRADLYHR 348 (510)
T ss_pred CCCCEEEEEEEEEEECCC---------CHHHH---------------------------HHCC--------CHHHHHHHH
T ss_conf 899466666899960783---------59999---------------------------8839--------638999987
Q ss_pred CCCE-EEECCCCH--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 7842-67211105--78999987426779999999987449899996899999999551067874236899999967
Q gi|254780271|r 307 LPVL-ATLEDLDE--NSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARCAIAHKTGARGLRSILEKILL 380 (424)
Q Consensus 307 lPii-V~L~~Lt~--edl~rILtepknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~~niGAR~LrtIiE~iLe 380 (424)
T Consensus 349 Lsv~~I~vPPLRER~eDI~lLa----~~FLe~~~~~~g~~--~~~ls~eAl~~L~~Y~WPGNV--RELenvIeRA~l 417 (510)
T PRK05022 349 LSVFPLPVPPLRERGDDVLLLA----GYFLEQNRLRLGLS--SLRLSPDAQAALLQYDWPGNV--RELEHVISRAAL 417 (510)
T ss_pred HHCCCCCCCCHHHCHHHHHHHH----HHHHHHHHHHCCCC--CCCCCHHHHHHHHCCCCCCHH--HHHHHHHHHHHH
T ss_conf 6204034808655554099999----99999999982989--898889999999709999789--999999999999