HHsearch alignment for GI: 254780271 and conserved domain: PRK05563
>PRK05563 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.21 E-value=1.5e-10 Score=94.48 Aligned_cols=111 Identities=25% Similarity=0.433 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEE-------EHH-HHHHH
Q ss_conf 3085999999999998658875212101355225683588407332176999999987185313-------101-22111
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFT-------MAD-ATTLT 150 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~-------~vd-aT~~T 150 (424)
T Consensus 18 vvgQ~~v~~~L~n~i~~~--~------------i~hayLf~GprG~GKTs~Ari~akalnc~~~~~~~pC~~C~~C~~i~ 83 (541)
T PRK05563 18 VVGQEHITTTLKNQIINN--R------------IAHAYLFCGTRGTGKTSTAKIFAKAVNCLNPQDGEPCNECEICKKIN 83 (541)
T ss_pred HCCCHHHHHHHHHHHHCC--C------------CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 248499999999999849--9------------32045303879958999999999995799988898575148899985
Q ss_pred HHHHC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 11103----------5563303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r 151 EAGYV----------GEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 219 (424)
Q Consensus 151 E~GYv----------G~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~ 219 (424)
T Consensus 84 ~-g~~~Dv~Eidaas~~gvd-~iR~~~~~~~~~p~~~~~Kv~IiDEvhmls~--------------~a~nallKtlEeP 146 (541)
T PRK05563 84 E-GLLMDVIEIDAASNNGVD-DIREIIENVKYPPQEGKYKVYIMDEVHMLSQ--------------GAVNAFLKTLEEP 146 (541)
T ss_pred C-CCCCCEEEECCCCCCCHH-HHHHHHHHCEECCCCCCEEEEEEECCCCCCH--------------HHHHHHHHHHHCC
T ss_conf 6-898873662444447889-9999997610487678705999977233899--------------9999999998548