HHsearch alignment for GI: 254780271 and conserved domain: PRK05564

Probab=98.84  E-value=7.2e-09  Score=82.65  Aligned_cols=108  Identities=21%  Similarity=0.346  Sum_probs=72.4

Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC--------CCEEEHHHHHH
Q ss_conf             0308599999999999865887521210135522568358840733217699999998718--------53131012211
Q gi|254780271|r   78 YVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIID--------VPFTMADATTL  149 (424)
Q Consensus        78 yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~--------~PF~~vdaT~~  149 (424)
T Consensus         5 ~iiGq~~i~~~L~~~i~~~-----------r---l~HAyLF~Gp~G~GK~~~A~~~A~~ll~~~~~~~~~D~~~~~~~~-   69 (313)
T PRK05564          5 TIIGHENIKNRIDNSIIKG-----------K---FSHASLIVGEDGIGKSILAKEIANKILGKSEQREYVDIIEYKPIN-   69 (313)
T ss_pred             HCCCHHHHHHHHHHHHHCC-----------C---CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC-
T ss_conf             3268299999999999879-----------9---875043279998509999999999982899778898658863322-


Q ss_pred             HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             1111035563303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r  150 TEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT  219 (424)
Q Consensus       150 TE~GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~  219 (424)
T Consensus        70 --~~~I--~vd~-IR~l~~~~~~~p~~g~~KV~II~~ae~m~~~--------------AaNALLKtLEEP  120 (313)
T PRK05564         70 --KKSI--GVDD-IRNIIEEVNKKPYEGDKKVIIIYKSEKMTEQ--------------AQNAFLKTIEEP  120 (313)
T ss_pred             --CCCC--CHHH-HHHHHHHHHHCCCCCCCEEEEECCHHHHCHH--------------HHHHHHHCCCCC
T ss_conf             --5699--9899-9999999840862589569998077775899--------------999984550368