HHsearch alignment for GI: 254780271 and conserved domain: PRK05703
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=97.36 E-value=0.00042 Score=49.34 Aligned_cols=24 Identities=46% Similarity=0.599 Sum_probs=17.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 568358840733217699999998
Q gi|254780271|r 112 AKSNILLVGPTGCGKTYLAQTLAR 135 (424)
Q Consensus 112 ~~~NILliGPTGvGKTelAr~LAk 135 (424)
T Consensus 209 ~~~vvalVGPTGVGKTTTiAKLAA 232 (412)
T PRK05703 209 QGGVVALVGPTGVGKTTTLAKLAA 232 (412)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 673699988888756769999999