HHsearch alignment for GI: 254780271 and conserved domain: PRK05707

Probab=97.88  E-value=4.1e-05  Score=56.35  Aligned_cols=105  Identities=25%  Similarity=0.367  Sum_probs=65.7

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC-------CEEEHHHHHHHHHHHCCC------C-CC
Q ss_conf             658875212101355225683588407332176999999987185-------313101221111110355------6-33
Q gi|254780271|r   95 NHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDV-------PFTMADATTLTEAGYVGE------D-VE  160 (424)
Q Consensus        95 nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~-------PF~~vdaT~~TE~GYvG~------D-ve  160 (424)
T Consensus        10 ~~w~~l~~---~~r---l~HA~Lf~G~~G~GK~~lA~~~A~~LlC~~~~~~~~Cg~C~sC~~~~~~~HPD~~~i~pe~~~   83 (328)
T PRK05707         10 SLWQQLAG---RGR---HAHAYLLHGPAGIGKRALAERLAAFLLCEAPQGGGACGSCKGCQLLAAGSHPDNFVLEPEEAD   83 (328)
T ss_pred             HHHHHHHH---CCC---CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCC
T ss_conf             99999997---798---220464479998679999999999984899999899988889999875899987998426667


Q ss_pred             -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             -----03577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r  161 -----NIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT  219 (424)
Q Consensus       161 -----sii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~  219 (424)
T Consensus        84 ~~I~IdqIR~l~~~~~~~~~~g~~KV~iI~~Ae~m~~--------------~AaNALLKtLEEP  133 (328)
T PRK05707         84 KPIKVDQVRELVSFVVQTAQLGGRKVVLIEPAEAMNR--------------NAANALLKSLEEP  133 (328)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCH--------------HHHHHHHHHHHCC
T ss_conf             7697999999999983176678957999502877389--------------9999999985078