HHsearch alignment for GI: 254780271 and conserved domain: PRK05818
>PRK05818 DNA polymerase III subunit delta'; Validated.
Probab=96.67 E-value=0.054 Score=34.53 Aligned_cols=93 Identities=17% Similarity=0.214 Sum_probs=57.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHH-----CCCEEEHHHHHHHHHHHCC------CCCCCH----HHHHHHHHHH-HHH
Q ss_conf 56835884073321769999999871-----8531310122111111035------563303----5778876542-277
Q gi|254780271|r 112 AKSNILLVGPTGCGKTYLAQTLARII-----DVPFTMADATTLTEAGYVG------EDVENI----ILKLLQAADY-NVE 175 (424)
Q Consensus 112 ~~~NILliGPTGvGKTelAr~LAk~l-----~~PF~~vdaT~~TE~GYvG------~Dvesi----i~~L~~~a~~-~v~ 175 (424)
T Consensus 7 ~~halLl~~~~G~~~~~~~~~~~k~LlC~~~~~PCG~C~sC~~i~~g~HPD~~~i~pe~~sIkieqir~li~~l~~~s~e 86 (262)
T PRK05818 7 KTHPLLLIERKGSFLKPFLYEYLTSIVCTKANGFCKTCESCLKILNGKYNDFYLIFDQKNPIKKEDALSIINKLNRPSVE 86 (262)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 98505664487764699999999986228999999888627867558999779971664557798999999998211400
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 6542233322333200233333344321025689887531058
Q gi|254780271|r 176 RAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEG 218 (424)
Q Consensus 176 ~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg 218 (424)
T Consensus 87 ~~g~KV~II~~Ae~Mt--------------~~AANALLKtLEE 115 (262)
T PRK05818 87 SNGKKIYIIYGIEKLN--------------KQSANSLLKLIEE 115 (262)
T ss_pred CCCCEEEEECCHHHHC--------------HHHHHHHHHHHCC
T ss_conf 2884899987778749--------------9999999986128