HHsearch alignment for GI: 254780271 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.23 E-value=1.2e-10 Score=95.09 Aligned_cols=112 Identities=26% Similarity=0.372 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC-------CEEEHHHHHHHH
Q ss_conf 3085999999999998658875212101355225683588407332176999999987185-------313101221111
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDV-------PFTMADATTLTE 151 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~-------PF~~vdaT~~TE 151 (424)
T Consensus 18 IIGQe~iv~~L~nAI~~~-----------R---iaHAYLFsGPrGvGKTTlArifAkaLnC~~~~~~dpCg~C~sC~~I~ 83 (613)
T PRK05896 18 IIGQELIKKILVNAILNN-----------K---LTHAYIFSGPRGIGKTSIAKIFAKAINCLNPKDGDCCNSCSVCESIN 83 (613)
T ss_pred HCCCHHHHHHHHHHHHCC-----------C---CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 238299999999999849-----------9---76227755899848899999999996699999999888887899985
Q ss_pred HHHC---------CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 1103---------55-63303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r 152 AGYV---------GE-DVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 219 (424)
Q Consensus 152 ~GYv---------G~-Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~ 219 (424)
T Consensus 84 ~g~h~DviEIdaasn~gID-eIReLie~~~~~P~~gkyKV~IIDEah~Ln~~--------------AaNALLKtLEEP 146 (613)
T PRK05896 84 TNQSVDIVELDAASNNGVD-EIRNIIDNINYLPTTFKYKVYIIDEAHMLSTS--------------AWNALLKTLEEP 146 (613)
T ss_pred CCCCCCEEEEECCCCCCHH-HHHHHHHHHCCCCCCCCCEEEEECCHHHCCHH--------------HHHHHHHHCCCC
T ss_conf 6999986884065557889-99999997085875799459998162217999--------------999999853489