HHsearch alignment for GI: 254780271 and conserved domain: PRK05917

>PRK05917 DNA polymerase III subunit delta'; Validated.
Probab=97.93  E-value=1.8e-05  Score=58.92  Aligned_cols=93  Identities=23%  Similarity=0.213  Sum_probs=54.5

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHC---CCEEEHHHHHHHHHHHC-----CC----CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             568358840733217699999998718---53131012211111103-----55----6330357788765422776542
Q gi|254780271|r  112 AKSNILLVGPTGCGKTYLAQTLARIID---VPFTMADATTLTEAGYV-----GE----DVENIILKLLQAADYNVERAQR  179 (424)
Q Consensus       112 ~~~NILliGPTGvGKTelAr~LAk~l~---~PF~~vdaT~~TE~GYv-----G~----Dvesii~~L~~~a~~~v~~a~~  179 (424)
T Consensus        18 l~HAyLf~Gp~G~GK~~~A~~~A~~LLc~~~p~~~~~i~~~~HPD~~~i~pe~k~~~~~Id-~iR~l~~~i~~~p~~g~~   96 (290)
T PRK05917         18 VPSAILLHGQDLSNLSQYAYELASLILLESSPEAQYKISQKIHPDIHEFFPEGKGRLHSIE-TPRAIKKQIWIHPYEANY   96 (290)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCHH-HHHHHHHHHCCCCCCCCC
T ss_conf             6606876899986599999999999857899616889874689985996157778878678-999999996418646882


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             2333223332002333333443210256898875310587
Q gi|254780271|r  180 GIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT  219 (424)
Q Consensus       180 ~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~  219 (424)
T Consensus        97 KV~IId~Ad~Mn~--------------~AaNALLKtLEEP  122 (290)
T PRK05917         97 KIYIIHEADRMTL--------------DAISAFLKVLEDP  122 (290)
T ss_pred             EEEEECCHHHHCH--------------HHHHHHHHHHCCC
T ss_conf             6999756776389--------------9999999973479