HHsearch alignment for GI: 254780271 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.25 E-value=1.5e-10 Score=94.34 Aligned_cols=112 Identities=26% Similarity=0.391 Sum_probs=77.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHH---------HHHH
Q ss_conf 3085999999999998658875212101355225683588407332176999999987185313101---------2211
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMAD---------ATTL 149 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~vd---------aT~~ 149 (424)
T Consensus 19 vVGQ~~vv~~L~nai~~~-----------r---i~HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~C~~I 84 (462)
T PRK06305 19 ILGQDAVVTVLKNALRFN-----------R---AAHAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAICKEI 84 (462)
T ss_pred HCCCHHHHHHHHHHHHCC-----------C---CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 049099999999999849-----------9---76234303899859999999999996799998888988766888998
Q ss_pred HHHHHC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 111103----------5563303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r 150 TEAGYV----------GEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 219 (424)
Q Consensus 150 TE~GYv----------G~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~ 219 (424)
T Consensus 85 ~~-g~~~DViEiDaAs~~gVdd-IRel~e~v~~~P~~~~yKVyIIDEvhmLs~~--------------AfNALLKtLEEP 148 (462)
T PRK06305 85 SS-GTSLDVIEIDGASHRGIED-IRQINETVLFTPSKSQYKIYIIDEVHMLTKE--------------AFNSLLKTLEEP 148 (462)
T ss_pred HC-CCCCCEEEECCCCCCCHHH-HHHHHHHHCCCCCCCCEEEEEEECHHHCCHH--------------HHHHHHHHHHCC
T ss_conf 63-8999868643553446689-9999977100886775059998152117999--------------999999986189
Q ss_pred E
Q ss_conf 0
Q gi|254780271|r 220 I 220 (424)
Q Consensus 220 ~ 220 (424)
T Consensus 149 P 149 (462)
T PRK06305 149 P 149 (462)
T ss_pred C
T ss_conf 8