HHsearch alignment for GI: 254780271 and conserved domain: PRK06526

Probab=97.51  E-value=6.7e-05  Score=54.90  Aligned_cols=95  Identities=24%  Similarity=0.328  Sum_probs=51.6

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHH-----CCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH-HHH-----HHHHHH
Q ss_conf             56835884073321769999999871-----8531310122111111035563303577887654-227-----765422
Q gi|254780271|r  112 AKSNILLVGPTGCGKTYLAQTLARII-----DVPFTMADATTLTEAGYVGEDVENIILKLLQAAD-YNV-----ERAQRG  180 (424)
Q Consensus       112 ~~~NILliGPTGvGKTelAr~LAk~l-----~~PF~~vdaT~~TE~GYvG~Dvesii~~L~~~a~-~~v-----~~a~~~  180 (424)
T Consensus        97 ~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~--~~-------------L~~~L~~a~~~g~~~~~~~~l~~~d  161 (254)
T PRK06526         97 GKENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATA--AQ-------------WVARLAAAHHAGRLQDELVKLGRIP  161 (254)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEH--HH-------------HHHHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             58878998999986899999999999986996799877--99-------------9999999885580999999851368


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCHHHH
Q ss_conf             333223332002333333443210256898875310587010256556432224302431000123
Q gi|254780271|r  181 IVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVDTTNILF  246 (424)
Q Consensus       181 iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~grk~~~~~~~~Idt~nilf  246 (424)
T Consensus       162 LLIiDe~g~~~------------~~~~~a~~lf~li~~Rye-------------~~S~IiTSn~~~  202 (254)
T PRK06526        162 LLIVDEVGYIP------------FEAEAANLFFQLVSSRYE-------------RASLIVTSNKPF  202 (254)
T ss_pred             EEEEECCCCCC------------CCHHHHHHHHHHHHHHHC-------------CCCEEEECCCCH
T ss_conf             77650213644------------788999999999999974-------------588676658986