HHsearch alignment for GI: 254780271 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=97.07 E-value=0.00043 Score=49.23 Aligned_cols=38 Identities=29% Similarity=0.519 Sum_probs=27.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHH---CCCEEEHHHHHHH
Q ss_conf 6835884073321769999999871---8531310122111
Q gi|254780271|r 113 KSNILLVGPTGCGKTYLAQTLARII---DVPFTMADATTLT 150 (424)
Q Consensus 113 ~~NILliGPTGvGKTelAr~LAk~l---~~PF~~vdaT~~T 150 (424)
T Consensus 183 ~~nLlf~G~~G~GKTfLa~~IA~ell~~g~sViy~ta~~L~ 223 (330)
T PRK06835 183 NENLLFYGNTGTGKTFLSNCIAKELLDRGKTVIYRTSDELI 223 (330)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHH
T ss_conf 88669889999988999999999999879949996299999