HHsearch alignment for GI: 254780271 and conserved domain: PRK06871

Probab=98.07  E-value=1.1e-05  Score=60.24  Aligned_cols=106  Identities=21%  Similarity=0.382  Sum_probs=64.1

Q ss_pred             HHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC-------CEEEHHHHHHHHHHHC----------CCC
Q ss_conf             58875212101355225683588407332176999999987185-------3131012211111103----------556
Q gi|254780271|r   96 HYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDV-------PFTMADATTLTEAGYV----------GED  158 (424)
Q Consensus        96 h~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~-------PF~~vdaT~~TE~GYv----------G~D  158 (424)
T Consensus         9 ~~~~l~~~~~~~r---~~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~sC~l~~~g~HPD~~~i~~~~~k~   85 (324)
T PRK06871          9 IYQQITQTFLQGR---GHHALLFKADSGLGTEQLIRALAQWLMCQAPGDEQPCGQCHSCHLFQAGNHPDFHILEPIDGKD   85 (324)
T ss_pred             HHHHHHHHHHCCC---CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCC
T ss_conf             9999999998699---5437876899997899999999999828999999988889899999738999879984678887


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             --3303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r  159 --VENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT  219 (424)
Q Consensus       159 --vesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~  219 (424)
T Consensus        86 I~vd-~IR~l~~~~~~~~~~g~~KV~iI~~ae~m~~~--------------AaNALLKtLEEP  133 (324)
T PRK06871         86 IGVD-QVREINEKVSQFAQQGGNKVVYIQGAERLTEA--------------AANALLKTLEEP  133 (324)
T ss_pred             CCHH-HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH--------------HHHHHHHHHCCC
T ss_conf             8899-99999999864622059669997588885799--------------999999983389