HHsearch alignment for GI: 254780271 and conserved domain: PRK06872

Probab=98.93  E-value=1.3e-08  Score=80.88  Aligned_cols=113  Identities=28%  Similarity=0.447  Sum_probs=78.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC-------CEEEHHH-HHHH
Q ss_conf             3085999999999998658875212101355225683588407332176999999987185-------3131012-2111
Q gi|254780271|r   79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDV-------PFTMADA-TTLT  150 (424)
Q Consensus        79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~-------PF~~vda-T~~T  150 (424)
T Consensus        18 ~vgq~~v~~~l~~a~~~~--r~------------~haylf~g~rg~gktt~ari~ak~lnc~~~~~~~pcg~c~~c~~i~   83 (696)
T PRK06872         18 VVGQEHILTALSNGLKEN--RL------------HHAYLFSGTRGVGKTSIARLFAKGLNCVHGVTATPCGECENCKAIE   83 (696)
T ss_pred             HCCCHHHHHHHHHHHHCC--CC------------CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf             238599999999999719--86------------3047511789888889999999986789999999788862257674


Q ss_pred             HHHHC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
Q ss_conf             11103---------55633035778876542277654223332233320023333334432102568988753105870
Q gi|254780271|r  151 EAGYV---------GEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTI  220 (424)
Q Consensus       151 E~GYv---------G~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~  220 (424)
T Consensus        84 ~g~~~d~~eidaas~~~v~~-~r~l~~~~~~~p~~~~~kvy~idevhmls~~--------------~fnallktleepp  147 (696)
T PRK06872         84 EGNFIDLIEIDAASRTKVED-TRELLDNVQYKPVVGRFKVYLIDEVHMLSRH--------------SFNALLKTLEEPP  147 (696)
T ss_pred             CCCCCCEEEEECCCCCCHHH-HHHHHHHCCCCCCCCCEEEEEEEHHHHCCHH--------------HHHHHHHHHCCCC
T ss_conf             47877546750565578899-9999984545776775479997005443899--------------9999987502797