HHsearch alignment for GI: 254780271 and conserved domain: PRK08181

>PRK08181 transposase; Validated.
Probab=97.61  E-value=5.3e-05  Score=55.59  Aligned_cols=101  Identities=21%  Similarity=0.318  Sum_probs=52.9

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHH-----CCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             56835884073321769999999871-----8531310122111111035563303577887654227765422333223
Q gi|254780271|r  112 AKSNILLVGPTGCGKTYLAQTLARII-----DVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDE  186 (424)
Q Consensus       112 ~~~NILliGPTGvGKTelAr~LAk~l-----~~PF~~vdaT~~TE~GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDE  186 (424)
T Consensus       105 ~~~Nvil~Gp~GtGKThLA~Alg~~A~~~G~~V~f~~~--~~L~~~L~~a~~~~~-~~~~~------~~l~~~dLLIiDe  175 (269)
T PRK08181        105 KGANLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTRT--TDLVQKLQVARRELQ-LESAI------AKLDKFDLLILDD  175 (269)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEH--HHHHHHHHHHHHCCC-HHHHH------HHHHCCCEEEEHH
T ss_conf             48708998999987889999999999987993999789--999999999775583-99999------9974446012201


Q ss_pred             HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCHHHH
Q ss_conf             332002333333443210256898875310587010256556432224302431000123
Q gi|254780271|r  187 VDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVDTTNILF  246 (424)
Q Consensus       187 idKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~grk~~~~~~~~Idt~nilf  246 (424)
T Consensus       176 ~G~~~------------~~~~~~~~lf~lI~~Ry-------------e~~S~IITSn~~~  210 (269)
T PRK08181        176 LAYVT------------KDQAETSVLFELISARY-------------ERRSILITANQPF  210 (269)
T ss_pred             CCCCC------------CCHHHHHHHHHHHHHHH-------------CCCCEEEECCCCH
T ss_conf             05667------------99899999999999985-------------7888899889997