HHsearch alignment for GI: 254780271 and conserved domain: PRK08691
>PRK08691 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.09 E-value=1.6e-09 Score=87.29 Aligned_cols=112 Identities=30% Similarity=0.491 Sum_probs=77.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC-------EEEHHH-HHHH
Q ss_conf 30859999999999986588752121013552256835884073321769999999871853-------131012-2111
Q gi|254780271|r 79 VIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVP-------FTMADA-TTLT 150 (424)
Q Consensus 79 VIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~P-------F~~vda-T~~T 150 (424)
T Consensus 18 ~vGQ~~v~~~L~nal~~~--rl------------~haylf~G~rGvGKTt~Ari~Ak~lNC~~~~~~~pCg~C~~C~~i~ 83 (704)
T PRK08691 18 LVGQEHVVKALQNALDEG--RL------------HHAYLLTGTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQID 83 (704)
T ss_pred HCCCHHHHHHHHHHHHHC--CC------------CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 418699999999999819--97------------5237502789878889999999996799999999787777678785
Q ss_pred HHHHC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 11103---------5563303577887654227765422333223332002333333443210256898875310587
Q gi|254780271|r 151 EAGYV---------GEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 219 (424)
Q Consensus 151 E~GYv---------G~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~ 219 (424)
T Consensus 84 ~g~~~D~~EiDaAs~~~vdd-~R~l~~~~~y~P~~~~yKVyiiDEvhmLs~~--------------afNAlLKtLEEP 146 (704)
T PRK08691 84 AGRYVDLLEIDAASNTGIDN-IREVLENAQYAPTAGKYKVYIIDEVHMLSKS--------------AFNAMLKTLEEP 146 (704)
T ss_pred CCCCCCEEEEECCCCCCHHH-HHHHHHHCCCCCCCCCEEEEEEECHHHCCHH--------------HHHHHHHHHCCC
T ss_conf 58998747742454458899-9999985346886785359998315443899--------------999999861479