HHsearch alignment for GI: 254780271 and conserved domain: PRK08727

Probab=96.01  E-value=0.0077  Score=40.47  Aligned_cols=173  Identities=20%  Similarity=0.248  Sum_probs=88.5

Q ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-EEEEECCCCCHHHHHHHHHHHHCC---CEEEHHHHH
Q ss_conf             9974203085999999999998658875212101355225683-588407332176999999987185---313101221
Q gi|254780271|r   73 RVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSN-ILLVGPTGCGKTYLAQTLARIIDV---PFTMADATT  148 (424)
Q Consensus        73 ~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~N-ILliGPTGvGKTelAr~LAk~l~~---PF~~vdaT~  148 (424)
T Consensus        16 ~tfdnFi~~~n~~~---a-~l~~~~~~-----~-------~~~~lyl~G~~GsGKTHLl~a~~~~~~~~~~~~~yl~l~~   79 (233)
T PRK08727         16 QRFDSYIAAPDGLL---A-QLQALAAG-----Q-------SSDWLYLSGPAGTGKTHLALSLCAAAEQAGRSSAYLPLQA   79 (233)
T ss_pred             CCHHHCCCCCHHHH---H-HHHHHHCC-----C-------CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHH
T ss_conf             24212067855999---9-99987438-----8-------8898999899999889999999999982799728844788


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCC
Q ss_conf             11111035563303577887654227765422333223332002333333443210256898875310587010256556
Q gi|254780271|r  149 LTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG  228 (424)
Q Consensus       149 ~TE~GYvG~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~g  228 (424)
T Consensus        80 ~~-----~-----~~~~~l~~------le~~~ll~iDDid~i~g~~~--------~e~aLFhL~N~~~~~----------  125 (233)
T PRK08727         80 AA-----G-----RLRDALEA------LEGRSLVALDGVDSIAGQRE--------DEVALFDFHNRARAA----------  125 (233)
T ss_pred             HH-----H-----HHHHHHHH------HCCCCEEEEECCHHCCCCHH--------HHHHHHHHHHHHHHC----------
T ss_conf             53-----2-----02567753------10389789855011269827--------999999999999861----------


Q ss_pred             CCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCC
Q ss_conf             43222430243100012322000467898876412343332111100000001689996410567775220689872078
Q gi|254780271|r  229 RKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGRLP  308 (424)
Q Consensus       229 rk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GRlP  308 (424)
T Consensus       126 ------~~~ll~ts~~~------------------------------------P~~l-~----------~~l~DL~SRL~  152 (233)
T PRK08727        126 ------GITLLYTARQM------------------------------------PDGL-A----------LVLPDLRSRLS  152 (233)
T ss_pred             ------CCEEEEECCCC------------------------------------HHHH-C----------CCHHHHHHHHH
T ss_conf             ------98389977989------------------------------------5662-3----------10021999996


Q ss_pred             --CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH
Q ss_conf             --42672111057899998742677999999998744989999689999999955
Q gi|254780271|r  309 --VLATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDALREIARCA  361 (424)
Q Consensus       309 --iiV~L~~Lt~edl~rILtepknsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A  361 (424)
T Consensus       153 ~~~~~~l~~~dD~~~~~iL~-----------~~a~~rg--l~l~~~V~~Yll~r~  194 (233)
T PRK08727        153 QCIRIGLPVLDDVARAAVLR-----------DRAQRRG--LALDEAAIDWLLTHG  194 (233)
T ss_pred             CCCEEEECCCCHHHHHHHHH-----------HHHHHCC--CCCCHHHHHHHHHHC
T ss_conf             69228857889799999999-----------9999869--999989999999856