HHsearch alignment for GI: 254780271 and conserved domain: PRK10867
>PRK10867 signal recognition particle protein; Provisional.
Probab=95.77 E-value=0.042 Score=35.27 Aligned_cols=106 Identities=21% Similarity=0.303 Sum_probs=56.2
Q ss_pred CCCHHHHHHHHHHHCCCHHHHH-----HHHHHHHHHHHHHHHCCC-CCCCCC-CCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9987899999742030859999-----999999986588752121-013552-256835884073321769999999871
Q gi|254780271|r 65 IPNPQEILRVLDEYVIGQGQAK-----KVLAVAVHNHYKRLAHSS-KSSNVE-LAKSNILLVGPTGCGKTYLAQTLARII 137 (424)
Q Consensus 65 ~~tP~eI~~~Ld~yVIGQ~~AK-----kavAvAv~nh~rR~~~~~-~~~~~e-i~~~NILliGPTGvGKTelAr~LAk~l 137 (424)
T Consensus 45 ~~vvk~~i~~vke~~~g~~v~~~l~p~q~i~kiv~~eL~~lLg~~~~~l~~~~~~p~VIm~vGLqGsGKTTT~aKLA~~l 124 (453)
T PRK10867 45 LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFL 124 (453)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 79999999999999633513578988999999999999998588876663378999699997468885185899999999
Q ss_pred C----CCEEEHHHHHHHHH------------------HHCCCCCCCHHHHHHHHH
Q ss_conf 8----53131012211111------------------103556330357788765
Q gi|254780271|r 138 D----VPFTMADATTLTEA------------------GYVGEDVENIILKLLQAA 170 (424)
Q Consensus 138 ~----~PF~~vdaT~~TE~------------------GYvG~Dvesii~~L~~~a 170 (424)
T Consensus 125 k~k~~k~vllvaaDt~RpaA~eQL~~la~~~~v~~~~~~~~~dp~~ia~~a~~~a 179 (453)
T PRK10867 125 REKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEA 179 (453)
T ss_pred HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHH
T ss_conf 9738983798558877058999999999851980436788998899999999999