HHsearch alignment for GI: 254780271 and conserved domain: PRK12723
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional.
Probab=96.89 E-value=0.0047 Score=41.99 Aligned_cols=24 Identities=50% Similarity=0.671 Sum_probs=17.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 568358840733217699999998
Q gi|254780271|r 112 AKSNILLVGPTGCGKTYLAQTLAR 135 (424)
Q Consensus 112 ~~~NILliGPTGvGKTelAr~LAk 135 (424)
T Consensus 173 k~~vi~lVGPTGvGKTTTiAKLAa 196 (388)
T PRK12723 173 KKRIFILVGPTGVGKTTTIAKLAA 196 (388)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH
T ss_conf 762899989988757879999999