HHsearch alignment for GI: 254780271 and conserved domain: PRK13833
>PRK13833 conjugal transfer protein TrbB; Provisional.
Probab=96.29 E-value=0.0035 Score=42.86 Aligned_cols=26 Identities=42% Similarity=0.604 Sum_probs=23.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 56835884073321769999999871
Q gi|254780271|r 112 AKSNILLVGPTGCGKTYLAQTLARII 137 (424)
Q Consensus 112 ~~~NILliGPTGvGKTelAr~LAk~l 137 (424)
T Consensus 143 ~r~nilVsGgTGSGKTTllnaL~~~i 168 (323)
T PRK13833 143 SRLNIVISGGTGSGKTTLANAVIAEI 168 (323)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 18968999177775689999999864