HHsearch alignment for GI: 254780271 and conserved domain: PRK13900
>PRK13900 type IV secretion system ATPase VirB11; Provisional.
Probab=96.88 E-value=0.00077 Score=47.44 Aligned_cols=27 Identities=37% Similarity=0.512 Sum_probs=24.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 568358840733217699999998718
Q gi|254780271|r 112 AKSNILLVGPTGCGKTYLAQTLARIID 138 (424)
Q Consensus 112 ~~~NILliGPTGvGKTelAr~LAk~l~ 138 (424)
T Consensus 159 ~r~NilI~G~TgSGKTTll~aL~~~ip 185 (332)
T PRK13900 159 SKKNIIISGGTSTGKTTFTNAALREIP 185 (332)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 487199988889889999999983589