HHsearch alignment for GI: 254780271 and conserved domain: PRK13948
>PRK13948 shikimate kinase; Provisional.
Probab=97.76 E-value=3.3e-05 Score=57.05 Aligned_cols=56 Identities=20% Similarity=0.305 Sum_probs=40.1
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 22568358840733217699999998718531310122111111035563303577887
Q gi|254780271|r 110 ELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168 (424)
Q Consensus 110 ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~Dvesii~~L~~ 168 (424)
T Consensus 7 p~~~~~IvLIG~mGsGKStiGk~LA~~l~~~fiD~D~~--Ie-~~~g~sI~eIF~~~GE 62 (182)
T PRK13948 7 PRPATFVALAGFMGTGKSRIGWELSRALALHFVDTDKL--IT-RVVGKSIPEVFAQEGE 62 (182)
T ss_pred CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEECHHH--HH-HHHCCCHHHHHHHHCH
T ss_conf 99998189889999988999999999969598888499--99-9889399999998489